dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001514_11|CGC11
Gene ID: MGYG000001514_01427
Location and strand information: 438111 - 439127 (-)
Family: CBM22|GH10
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase B
Protein isoelectric point: 5.2899
Protein molecular weight: 38939.95
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001514_11|CGC11
Gene ID: MGYG000001514_01428
Location and strand information: 439209 - 440168 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001514_11|CGC11
Gene ID: MGYG000001514_01429
Location and strand information: 440171 - 441130 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000001514_11|CGC11
Gene ID: MGYG000001514_01430
Location and strand information: 441209 - 442897 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001514_11|CGC11
Gene ID: MGYG000001514_01431
Location and strand information: 443034 - 444578 (-)
Family: none
Protein type: TF
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000001514_11|CGC11
Gene ID: MGYG000001514_01432
Location and strand information: 444596 - 446392 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001514_11|CGC11
Gene ID: MGYG000001514_01433
Location and strand information: 446393 - 447952 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001514_11|CGC11
Gene ID: MGYG000001514_01434
Location and strand information: 448132 - 448773 (+)
Family: CE4
Protein type: CAZyme
Protein description: Peptidoglycan-N-acetylmuramic acid deacetylase PdaC
Protein isoelectric point: 4.8562
Protein molecular weight: 23741.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001514_11|CGC11
Gene ID: MGYG000001514_01435
Location and strand information: 449036 - 449506 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001514_11|CGC11
Gene ID: MGYG000001514_01436
Location and strand information: 449579 - 454765 (-)
Family: PL9|CBM35|SLH|PL9_1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5185
Protein molecular weight: 183288.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001514_11|CGC11
Gene ID: MGYG000001514_01437
Location and strand information: 455226 - 457040 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001514_11|CGC11
Gene ID: MGYG000001514_01438
Location and strand information: 457018 - 458568 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000001514_11|CGC11
Gene ID: MGYG000001514_01439
Location and strand information: 458692 - 460953 (+)
Family: CBM27|GH44|CBM35|GH26|CBM3
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4791
Protein molecular weight: 82400.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001514_11|CGC11
Gene ID: MGYG000001514_01440
Location and strand information: 461058 - 463220 (+)
Family: GH36
Protein type: CAZyme
Protein description: Alpha-galactosidase AgaA
Protein isoelectric point: 5.5855
Protein molecular weight: 81208.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001514_11|CGC11
Gene ID: MGYG000001514_01441
Location and strand information: 463495 - 464454 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000001514_11|CGC11
Gene ID: MGYG000001514_01442
Location and strand information: 464490 - 465425 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001514_11|CGC11
Gene ID: MGYG000001514_01443
Location and strand information: 465526 - 467226 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001514_11|CGC11
Gene ID: MGYG000001514_01444
Location and strand information: 467250 - 468221 (+)
Family: GH26
Protein type: CAZyme
Protein description: Mannan endo-1,4-beta-mannosidase
Protein isoelectric point: 5.1436
Protein molecular weight: 37348.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001514_01427	Endo-1,4-beta-xylanase B	CAZyme	438111	439127	-	CBM22\| GH10
MGYG000001514_01428	L-arabinose transport system permease protein AraQ	TC	439209	440168	-	3.A.1.1.29
MGYG000001514_01429	putative multiple-sugar transport system permease YteP	TC	440171	441130	-	3.A.1.1.29
MGYG000001514_01430	hypothetical protein	TC	441209	442897	-	3.A.1.1.29
MGYG000001514_01431	Regulator of RpoS	TF	443034	444578	-	none
MGYG000001514_01432	hypothetical protein	TC	444596	446392	-	8.A.59.2.1
MGYG000001514_01433	HTH-type transcriptional activator RhaR	TF	446393	447952	-	HTH_AraC+HTH_AraC
MGYG000001514_01434	Peptidoglycan-N-acetylmuramic acid deacetylase PdaC	CAZyme	448132	448773	+	CE4
MGYG000001514_01435	hypothetical protein	null	449036	449506	-	AHSA1
MGYG000001514_01436	hypothetical protein	CAZyme	449579	454765	-	PL9\| CBM35\| SLH\| PL9_1
MGYG000001514_01437	hypothetical protein	TC	455226	457040	+	8.A.59.2.1
MGYG000001514_01438	Regulator of RpoS	TF	457018	458568	+	HTH_AraC+HTH_AraC
MGYG000001514_01439	hypothetical protein	CAZyme	458692	460953	+	CBM27\| GH44\| CBM35\| GH26\| CBM3
MGYG000001514_01440	Alpha-galactosidase AgaA	CAZyme	461058	463220	+	GH36
MGYG000001514_01441	putative multiple-sugar transport system permease YteP	TC	463495	464454	+	3.A.1.1.29
MGYG000001514_01442	L-arabinose transport system permease protein AraQ	TC	464490	465425	+	3.A.1.1.29
MGYG000001514_01443	hypothetical protein	TC	465526	467226	+	3.A.1.1.29
MGYG000001514_01444	Mannan endo-1,4-beta-mannosidase	CAZyme	467250	468221	+	GH26
Protein ID	Protein Name	Type	Start	End	Strand	Signature